PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G037400.1.p
Common NamePRUPE_ppa011217mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 224aa    MW: 25399.9 Da    PI: 5.7868
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G037400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.3e-0969116454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         a+  rE+ RR+r+N++f eL  +l +    + +K +K +iL  A++ + +L
  Prupe.1G037400.1.p  69 AKACREKLRRERLNDRFVELSAVLEPG---RPPKSDKPAILDDAIRVLTQL 116
                         6778**********************8...89**************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.34165116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.88E-769121No hitNo description
PfamPF000109.2E-769116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.5E-871122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.58E-1271139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1071138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MYSLMEEWIE YLDYIDETTQ PSDFLWPNDT PSFREFEFSA VDVPAAFSPE KECPRKRGRT  60
DSSCPGSGAK ACREKLRRER LNDRFVELSA VLEPGRPPKS DKPAILDDAI RVLTQLRAEA  120
QELKETNQKL LEEVKSLKAE KNELREEKLV LKADKERLEQ QLKGMAISPS GFVPTHPAVP  180
AAYHPGASKM AMYPSYSLVP MWHYLPPSVR DTSRDHELRP PAA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15359PRKRGRT
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.60430.0fruit
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00102PBMTransfer from AT4G14410Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223393.11e-161hypothetical protein PRUPE_ppa011217mg
SwissprotQ8L4678e-83BH104_ARATH; Transcription factor bHLH104
TrEMBLM5XEQ11e-160M5XEQ1_PRUPE; Uncharacterized protein
STRINGGLYMA10G01010.13e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF81792537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.23e-84bHLH family protein